lunar (1) picopore-rename.1.gz
NAME
picopore-rename - renaming groups and datasets within Oxford Nanopore Technologies FAST5 files
SYNOPSIS
[-h] -p PATTERN -r REPLACEMENT [-v] [-y] [-t INT] [--prefix STR] [--skip-root] [--print-every INT] [input [input ...]]
DESCRIPTION
A tool for renaming groups and datasets within Oxford Nanopore Technologies FAST5 files
OPTIONS
positional arguments: input list of directories or fast5 files to shrink optional arguments: -h, --help show this help message and exit -p PATTERN, --pattern PATTERN String or regex to replace -r REPLACEMENT, --replacement REPLACEMENT String or regex replacement for PATTERN -v, --version show version number and exit -y skip confirm step -t INT, --threads INT number of threads (Default: 1) --prefix STR add prefix to output files to prevent overwrite --skip-root, --no-skip-root ignore files in root input directories for albacore realtime compression (Default: --no-skip-root) --print-every INT print a dot every approximately INT files, or -1 to silence (Default: 100)
AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.