Provided by: libbio-perl-perl_1.7.8-1_all
NAME
Bio::Tools::Prints - Parser for FingerPRINTScanII program
SYNOPSIS
use Bio::Tools::Prints; my $prints_parser = Bio::Tools::Prints->new(-fh =>$filehandle ); while( my $prints_feat = $prints_parser->next_result ) { push @prints_feat, $prints_feat; }
DESCRIPTION
PRINTScan II is a PRINTS fingerprint identification algorithm. Copyright (C) 1998,1999 Phil Scordis
FEEDBACK
Mailing Lists User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated. bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists Support Please direct usage questions or support issues to the mailing list: bioperl-l@bioperl.org rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible. Reporting Bugs Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web: https://github.com/bioperl/bioperl-live/issues
AUTHOR - Balamurugan Kumarasamy
bala@tll.org.sg juguang@tll.org.sg
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ new Title : new Usage : my $obj = Bio::Tools::Prints->new(-fh=>$filehandle); Function: Builds a new Bio::Tools::Prints object Returns : Bio::Tools::Prints Args : -filename -fh (filehandle) next_result Title : next_result Usage : my $feat = $prints_parser->next_result Function: Get the next result set from parser data Returns : L<Bio::SeqFeature::Generic> Args : none create_feature Title : create_feature Usage : my $feat=$prints_parser->create_feature($feature,$seqname) Function: creates a SeqFeature Generic object Returns : L<Bio::SeqFeature::FeaturePair> Args : print_sac Title : print_sac Usage : $prints_parser->print_sac($print_sac) Function: get/set for print_sac Returns : Args : seqname Title : seqname Usage : $prints_parser->seqname($seqname) Function: get/set for seqname Returns : Args :