NAME

       Honey - genomic structural variation discovery

SYNOPSIS

       Honey {subcommand}[options]

DESCRIPTION

       PBHoney  is an implementation of two variant-identification approaches designed to exploit
       the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers  both
       intra-read  discordance  and  soft-clipped  tails  of  long  reads  to identify structural
       variants.

OPTIONS

       For a complete description, see the help menu

       -h, --help
              Show summary of options.

SEE ALSO

       blasr(1)
       /usr/share/doc/pbhoney/HoneyReadme.txt

                                          February 2016                                  HONEY(1)