NAME

       TIFFToDicom  -  Read  a TIFF image input format file and create an image of a specified or
       appropriate SOP Class.

SYNOPSIS

       TIFFToDicom jsonfile inputFile  outputFilePrefix  [modality  [SOPClass  [TransferSyntax]]]
       [ADDTIFF|DONOTADDTIFF]        [USEBIGTIFF|DONOTUSEBIGTIFF]        [ALWAYSWSI|NOTALWAYSWSI]
       [ADDPYRAMID|DONOTADDPYRAMID]  [MERGESTRIPS|SPLITSTRIPS]   [ADDDCMSUFFIX|DONOTADDDCMSUFFIX]
       [INCLUDEFILENAME|DONOTINCLUDEFILENAME]  [CHANNELFILE  channelfile]  [SPACINGMM  spacingmm]
       [SPACINGROWCOLMM spacingrowmm(y) spacingcolmm(x)] [THICKNESSMM thickness]

DESCRIPTION

       Error: Incorrect number of arguments or bad arguments

OPTIONS

        jsonfile - JSON file describing the functional groups and attributes  and  values  to  be
       added or replaced
        inputFileName -
        outputFilePrefix -
        outputFileSuffix -
        modality - may be null
        sopClass - may be null
        transferSyntax  -  may  be  null,  used  if multiframe, ignored if single frame (which is
       always written uncompressed)
        addTIFF -  whether  or  not  to  add  a  TIFF  IFD  in  the  DICOM  preamble  to  make  a
       dual=personality DICOM-TIFF file sharing the same pixel data
        useBigTIFF - whether or not to create a BigTIFF rather than Classic TIFF file
        alwaysWSI  -  whether  or  not  to add WSI-related information even if not WSI SOP Class,
       e.g., for float converted to parametric map
        addPyramid - whether or not to add multi-resolution pyramid (downsampled) layers  to  the
       TIFF IFD and a corresponding DICOM private data element in the same file
        mergeStrips  -  whether  or  not to merge an image with more than one strip into a single
       DICOM image, or to create a separate image or frame for each strip
        channelFile - may be null
        includeFileName - whether or not to record the original filename in the DICOM output
        spacingrowmm - PixelSpacing 1st value - spacing between adjacent rows (i.e. "y"  spacing)
       (in  mm) to use to override base layer spacing in case it is incorrect or not present (may
       be 0 if not supplied)
        spacingcolmm - PixelSpacing 2nd value  -  spacing  between  adjacent  columns  (i.e.  "x"
       spacing)  (in  mm)  to  use  to override base layer spacing in case it is incorrect or not
       present (may be 0 if not supplied)
        thicknessmm - SliceThickness and ImagedVolumeDepth value (in mm) to use (may be 0 if  not
       supplied)

EXAMPLES

       $      TIFFToDicom      /etc/pixelmed/TIFFToDicom.WSI.json     CMU-1.svs     my_wsi     SM
       1.2.840.10008.5.1.4.1.1.77.1.6

AUTHOR

       This manual page was written  by  Mathieu  Malaterre  <malat@debian.org>  for  the  Debian
       GNU/Linux system (but may be used by others).

SEE ALSO

       OrthancWSIDicomizer