NAME

       fastaq_add_indels - Deletes or inserts bases at given position(s)

DESCRIPTION

       usage: fastaq_add_indels [options] <infile> <outfile>

       Deletes or inserts bases at given position(s)

   positional arguments:
       infile Name of input file

       outfile
              Name of output file

   options:
       -h, --help
              show this help message and exit

       -d Name:start:bases, --delete Name:start:bases
              Delete  the  given  bases  from  the  given sequence. Format same as samtools view:
              name:start-end. This option can be used multiple times (once  for  each  region  to
              delete). Overlapping coords will be merged before deleting

       --delete_range P,start,step
              Deletes  bases  starting  at position P in each sequence of the input file. Deletes
              start + (n-1)*step bases from sequence n.

       -i Name:start:bases, --insert Name:start:bases
              Insert  a  random  string  of   bases   at   the   given   position.    Format   is
              name:position:number_to_add. Bases are added after the position. This option can be
              used multiple times

       --insert_range P,start,step
              Inserts random bases starting after position P in each sequence of the input  file.
              Inserts start + (n-1)*step bases into sequence n.