Provided by: python3-gffutils_0.12-1_all
NAME
gffutils-cli_parents - Fetch parents from the database according to ID
DESCRIPTION
usage: gffutils-cli parents [-h] [--limit LIMIT] [--exclude EXCLUDE] [--exclude-self] db [ids] Fetch parents from the database according to ID. positional arguments: db Database to use. If a GFF or GTF file is provided instead for this argument, a database will be created for you. This can take some time (several minutes), so it's best to create one ahead of time. ids Comma-separated list of IDs. These IDs, along with their parents, will be returned (subject to --limit and --exclude). If none provided, use all exons in the database (default: -) options: -h, --help show this help message and exit --limit LIMIT Feature type (string), or level (integer). No parents below this level will be returned (default: -) --exclude EXCLUDE Comma-separated list of featuretypes to filter out (like grep -v) (default: -) --exclude-self Use this to suppress reporting the IDs you've provided. (default: False)