NAME

       gt-compreads-decompress - Decodes a file of compressed reads.

SYNOPSIS

       gt compreads decompress [option ...] (-file file)

DESCRIPTION

       -v [yes|no]
           be verbose (default: no)

       -descs [yes|no]
           enable description decoding (default: no)

       -file [string]
           specify base name of files containing HCR. (default: undefined)

       -name [string]
           specify base name for decoded hcr (suffix will be ".fastq") (default: undefined)

       -smap [string]
           specify file containing alphabetdescription (file must be an .al1 file). If "-smap" is
           not set, dna alphabet is used. (default: undefined)

       -range [start end]
           decode multiple consecutive reads. If range is not specified, the entire file will be
           decoded. (default: undefined)

       -width [value]
           set width of output, 0 disables formatting. line breaks in quality strings can cause
           problems with parsers, use with care (default: 0)

       -help
           display help and exit

       -version
           display version information and exit

REPORTING BUGS

       Report bugs to https://github.com/genometools/genometools/issues.