NAME

       mhap - probabilistic sequence overlapping

SYNOPSIS

       mhap  -s<fasta/dat  from/self  file> [-q<fasta/dat to file>] [-f<kmer filter list, must be
       sorted>]
       java -server -Xmx<memory> -jar $(which mhap) -s<fasta/dat from/self file> [-q<fasta/dat to
       file>] [-f<kmer filter list, must be sorted>]
       generate precomputed binaries:
       java  -server  -Xmx<memory>  -jar  $(which  mhap)  -p<directory of fasta files> -q <output
       directory> [-f<kmer filter list, must be sorted>]

DESCRIPTION

       MHAP (MinHash Alignment Protocol) is a tool for finding overlaps  of  long-read  sequences
       (such as PacBio or Nanopore) in bioinformatics.

OPTIONS

       -h --help
              Show summary of available options.

       --version
              Displays the version.