NAME

       Genome - pipelines, tools, and data management for genomics

SYNOPSIS

        use Genome;

        # modules in the Genome namespace will now dynamically load

        @i = Genome::InstrumentData::Illumina->get(...);
        $m = Genome::Model::SomaticVariation->create(...);

DESCRIPTION

       This is the base namespace module for the Genome software tree.

       That tree has several primary components:

        Genome::Model:         a data modeling pipeline management system for genomics

        Genome::Model::Tools   a tree of >1000 tools and tool wrappers for genomics

        Genome::*              a variety of sample tracking classes with an RDBMS back-end

       Only the tools system is currently released.

       See genome for a complete inventory of all tool packages, and for command-line access to
       those tools.

AUTHORS

        This software is developed by the analysis and engineering teams at
        The Genome Center at Washington Univiersity in St. Louis, with funding from
        the National Human Genome Research Institute.  Richard K. Wilson, P.I.

        Scott Abbott
        Travis Abbott
        Edward Belter
        Paul Bender
        Anthony Brummett
        Todd C. Carter
        Matthew Callaway
        C.J. Carey
        Lynn Carmichael
        Ken Chen
        Lei Chen
        Eric Clark
        Kevin Crouse
        Indraniel Das
        Nathan Dees
        Eric deMello
        Brian Derickson
        Alice Diec
        David Dooling
        Feiyu Du
        Adam Dukes
        James Eldred
        Xian Fan
        Ian Ferguson
        Chris Harris
        Amy Hawkins
        Todd Hepler
        Xin Hong
        Shunfang Hou
        Jasreet Hundal
        Erik Hvatum
        Mark Johnson
        Krisha-Latha Kanchi
        Cyriac Kandoth
        Phil Kimmey
        Michael Kiwala
        Daniel Koboldt
        Karthik Kota
        Kim Kyung
        David Larson
        Sai Lek
        Shawn Leonard
        Shin Leong
        Ling Lin
        Justin Lolofie
        Robert Long
        Charles Lu
        John Martin
        Josh McMichael
        Rick Meyer
        Thomas Mooney
        William Nash
        Nathan Nutter
        Ben Oberkfell
        John Osborne
        Josh Peck
        Jerome Peirick
        Craig Pohl
        Ryan Richt
        Noorus Sahar Abubucker
        Gabriel Sanderson
        William Schierding
        Jon Schindler
        William Schroeder
        Christopher Schuster
        Xiaoqi Shi
        Scott Smith
        Sasi Suruliraj
        Kenneth Swanson
        Jason Walker
        John Wallis
        Jim Weible
        Mike Wendl
        Todd Wylie

LICENSE

       Copyright (C) 2007-2011 Washington University in St. Louis.

       It is released under the Lesser GNU Public License (LGPL) version 3.  See the associated
       LICENSE file in this distribution.

BUGS

       For defects with any software in the genome namespace, contact genome-dev ~at~
       genome.wustl.edu.