NAME

       mk_phantom_3d - Generate phantom image

SYNOPSIS

       mk_phantom_3d [options] command0 [command1 ...]        sphere x,y,z radius value       box
       x0,y0,z0 x1,y1,z1 value

DESCRIPTION

       Generate 3D digital phantom images using a selection of drawing commands

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Main Options
       --dims <string>, -D <string>
            Set dimensions in voxels

       --voxel <string>, -V <string>
            Set voxel size in [mm]

       --coordinates
            Coordinate specification mode.  Supported values: "indexed", "absolute",  "relative",
            where the default is "indexed", or use one of the following:

            --indexed
                 Use  grid  indexes  to  specify coordinates. For each dimension, the valid value
                 range is [0,Dims-1].  [This is the default]

            --absolute
                 Use absolute volume coordinates. For each dimension, the valid range is [0,FOV].

            --relative
                 Use relative volume coordinates. For each dimension, the valid range is [0,1].

       --char, -c
            8 bits, signed

       --byte, -b
            8 bits, unsigned

       --short, -s
            16 bits, signed

       --ushort, -u
            16 bits, unsigned [This is the default]

       --int, -i
            32 bits signed

       --float, -f
            32 bits floating point

       --double, -d
            64 bits floating point

       --bg <double>, -B <double>
            Set the image background value (use to initialize newly created image).  [Default: 0]

       --import <string>, -I <string>
            Import image [Default: NONE]

       --import-grid <string>
            Import image grid only, ignore data [Default: disabled]

       --outfile <string>, -o <string>
            File name for output image [Default: phantom.nii ]

AUTHORS

       Torsten Rohlfing, with contributions from Michael  P.  Hasak,  Greg  Jefferis,  Calvin  R.
       Maurer, Daniel B. Russakoff, and Yaroslav Halchenko

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on
       Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data  Integration  Component.  From
       April  2009  through September 2011, CMTK development and maintenance was supported by the
       NIBIB under Grant EB008381.