Provided by: cmtk_3.3.1p2+dfsg-2build1_amd64
NAME
xform2itk - Convert affine transformations to ITK format.
SYNOPSIS
xform2itk InputPath OutputPath
DESCRIPTION
This tool converts coordinate transformations from CMTK format to ITK format and, in the process, also correct for differences in image coordinate conventions
OPTIONS
Global Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Input parameters --fixed-space <string> Change fixed image coordinate space (e.g., 'RAS', 'LPS', ...). This defaults to ITK standard space. [Default: LPS ] --moving-space <string> Change moving image coordinate space (e.g., 'RAS', 'LPS', ...). This defaults to ITK standard space. [Default: LPS ] --invert-input Invert input transformation before conversion Output parameters --fixed-image <string> Override transformation's fixed/reference image (if any) with this one. [Default: NONE] --moving-image <string> Override transformation's moving/floating image (if any) with this one. [Default: NONE]
AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko
LICENSE
http://www.fsf.org/licensing/licenses/gpl.html
BUGS
Report bugs at http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS
CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.