NAME

       eufindtRNA - detection of transfer RNA genes in genomic sequence

SYNOPSIS

       eufindtRNA [-options] <sequence file>

DESCRIPTION

       eufindtRNA 1.1, Aug 2000

       Find tRNAs in eukaryotic sequences

       Available  options:  -h             : help - print version and usage info -o <outfile>   :
       save tRNAs in <outfile> -r             : relaxed mode (no  terminators  searched  for)  -s
       :  strict  mode  (discard  tRNAs  with  missing  terminators)  -l  <length>     :  set max
       intron+variable loop length (default=140) -X <Score>     : manually set final score cutoff
       to  <Score> (def=-31.8) -I <Score>     : set cutoff for intermediate score (def=-31.25) -D
       : save tRNA score components (for Debugging) -F             : don't check for uppercase or
       DNA alphabet -i <integer>   : start nucleotide numbering at <integer> (def=1)

AUTHOR

        This manpage was written by Nilesh Patra for the Debian distribution and
        can be used for any other usage of the program.