NAME

       fastaq_to_tiling_bam  -  Make  a  BAM  file  of  reads  uniformly  spread across the input
       reference

DESCRIPTION

       usage: fastaq_to_tiling_bam [options]  <infile>  <read_length>  <read_step>  <read_prefix>
       <outfile>

       Takes  a  sequence  file.  Makes a BAM file containing perfect (unpaired) reads tiling the
       whole genome

   positional arguments:
       infile Name of input fasta/q file

       read_length
              Length of reads

       read_step
              Distance between start of each read

       read_prefix
              Prefix of read names

       outfile
              Name of output BAM file

   options:
       -h, --help
              show this help message and exit

       --qual_char QUAL_CHAR
              Character to use for quality score [I]

       --read_group READ_GROUP
              Add the given read group ID to all reads [42]

       Important: assumes that samtools is in your path