NAME

       hts-nim-tools - manual page for hts-nim-tools

DESCRIPTION

       hts-nim utility programs.  version: 0.2.0

       ??? bam-filter
              : filter BAM/CRAM/SAM files with a simple expression language

              ??? copy-number-sampler : sample BAM regions with a probability given in a BED file
              (for creating CN truth-sets) ??? count-reads          :  count  BAM/CRAM  reads  in
              regions  given  in  a  BED  file  ???  vcf-check           : check regions of a VCF
              against a background for missing chunks

       hts-nim utility programs.  version: 0.2.0

       ??? bam-filter
              : filter BAM/CRAM/SAM files with a simple expression language

              ??? copy-number-sampler : sample BAM regions with a probability given in a BED file
              (for  creating  CN  truth-sets)  ???  count-reads         : count BAM/CRAM reads in
              regions given in a BED file ???  vcf-check            :  check  regions  of  a  VCF
              against a background for missing chunks