NAME

       slice_fasta_gff - Slice subsequences from an input FASTA file

SYNOPSIS

       slice_fasta [options] <FASTA file> <GFF file>

DESCRIPTION

       slice_fasta from FSA 1.15.9

OPTIONS

       -t, --type <string>
              only look at features of particular type

       Slice  subsequences  from an input FASTA file.  Assumes 1-based, fully-closed coordinates.
       If no strand information is available, then the + strand is assumed.  If the -  strand  is
       requested, then the subsequence is pulled out and then reverse-complemented.

       Assumes a DNA alphabet.

AUTHOR

       This  manpage was written by Andreas Tille for the Debian distribution and can be used for
       any other usage of the program.