Provided by: libvcflib-tools_1.0.9+dfsg1-2_amd64
NAME
vcfstreamsort
SYNOPSIS
vcfstreamsort options [vcf file]
DESCRIPTION
Sorts the input (either stdin or file) using a streaming sort algorithm. Guarantees that the positional order is correct provided out-of-order variants are no more than 100 positions in the VCF file apart.
OPTIONS
options: -h, --help this dialog -w, --window N number of sites to sort (default 10000) -a, --all load all sites and then sort in memory Type: transformation
EXIT VALUES
0 Success not 0 Failure
SEE ALSO
vcflib(1)
OTHER
LICENSE
Copyright 2011-2023 (C) Erik Garrison and vcflib contributors. MIT licensed.
AUTHORS
Erik Garrison and vcflib contributors.