Name

       SWISS::CCcatalytic_activity

Description

       SWISS::CCcofactor represents a comment on the topic 'CATALYTIC ACTIVITY' within a Swiss-Prot or TrEMBL
       entry as specified in the user manual http://www.expasy.org/sprot/userman.html .  Comments on other
       topics are stored in other types of objects, such as SWISS::CC (see SWISS::CCs for more information).

       Collectively, comments of all types are stored within a SWISS::CCs container object.

Inherits from

       SWISS::BaseClass

Attributes

       topic
           The topic of this comment ('CATALYTIC ACTIVITY').

       form
           The protein form concerned by this comment (undef/empty = canonical/displayed form OR unknown)

       comment
           The "text" version of this comment (without evidences and new lines).

       activity_rhea
           The rhea id (e.g. RHEA:18037) of the reaction (only for new structured CC CATALYTIC ACTIVITY)

       activity_rhea( $new_rhea_id, $new_optional_reaction_ev )
           Set  rhea  activity  to $new_rhea_id (and reaction ev to $new_optional_reaction_ev if provided) (only
           for new structured CC CATALYTIC ACTIVITY)

       activity_reaction
           The reaction txt (e.g. agmatine + H2O = N-carbamoylputrescine + NH4(+))

       activity_reaction( $new_reaction_txt )
           Set reaction txt to $new_reaction_txt (on old unstructured format: extra $ev could be added)

       activity_ec
           The reaction EC (e.g. 3.5.3.12)

       activity_ec( $new_reaction_ec, , $new_optional_reaction_ev )
           Set reaction EC to $new_reaction_ec (and reaction ev to $new_optional_reaction_ev if provided)  (only
           for new structured CC CATALYTIC ACTIVITY)

       activity_participant
           The  reaction  participants  as  a  String  Array  (e.g.  [ "ChEBI:CHEBI:15377", "ChEBI:CHEBI:28938",
           "ChEBI:CHEBI:58145",  "ChEBI:CHEBI:58318"  ])  (participant  are   shown   as   dbtype:id   e.g.   in
           "ChEBI:CHEBI:15377"  CheBI  is  db  type,  CHEBI:15377  is  (CheBi)  id)  (only for new structured CC
           CATALYTIC ACTIVITY)

       activity_participant( $new_participant_array )
           Set reaction participants to $new_participant_array (array of strings) (only for  new  structured  CC
           CATALYTIC ACTIVITY)

       directions
           The  directions:  Array  of direction structures as hash e.g. [ { 'txt' => 'left-to-right', 'rhea' =>
           'RHEA:16846', 'ev' => '{ECO:0000269|PubMed:29420286}' } ] p.s. in well formed  UniProtKB  data  'txt'
           will be 'right-to-left' or 'left-to-right' (in that order); there should be no more than 2 directions
           (minimum: 0)

       direction( $new_directions )
           Set directions Array to $new_directions ...  (only for new structured CC CATALYTIC ACTIVITY)

       new
       fromText
       toString
           Returns a string representation of this comment.

POD ERRORS

       Hey! The above document had some coding errors, which are explained below:

       Around line 293:
           =back doesn't take any parameters, but you said =back  =head1 Methods

       Around line 347:
           =back doesn't take any parameters, but you said =back  =head2 Standard methods

perl v5.32.1                                       2021-08-15                   SWISS::CCcatalytic_activity(3pm)