noble (7) gistandard.7.gz

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NAME

       gistandard  - Process a spectro-photometric standard star observation and compute the instrument response
       curve.

SYNOPSIS

       esorex gistandard [OPTIONS] FILE.sof

DESCRIPTION

       For detailed information please refer to the GIRAFFE pipeline user manual.

       It is available at http://www.eso.org/pipelines.

OPTIONS

       --remove-bias <bool>
              Enable bias removal  (bool;  default:  True).  The  full  name  of  this  option  for  the  EsoRex
              configuration file is giraffe.biasremoval.remove [default = True].

       --bsremove-method <str>
              Bias  removal  method  (str;  default:  ´PROFILE´).  The  full  name of this option for the EsoRex
              configuration file is giraffe.biasremoval.method [default = PROFILE].

       --bsremove-areas <str>
              Bias areas to use (Xl0:Xr0:Yl0:Yr0, ... ,Xln:Xrn:Yln:Yrn) (str; default: ´5:40:0:4095´). The  full
              name  of  this  option  for  the EsoRex configuration file is giraffe.biasremoval.areas [default =
              5:40:0:4095].

       --bsremove-sigma <float>
              Sigma Clipping: sigma threshold factor (float; default: 2.5). The full name of this option for the
              EsoRex configuration file is giraffe.biasremoval.sigma [default = 2.5].

       --bsremove-niter <int>
              Sigma  Clipping:  maximum number of iterations (int; default: 5). The full name of this option for
              the EsoRex configuration file is giraffe.biasremoval.iterations [default = 5].

       --bsremove-mfrac <float>
              Sigma Clipping: minimum fraction of points accepted/total [0.0..1.0] (float;  default:  0.8).  The
              full  name  of  this  option  for  the  EsoRex  configuration file is giraffe.biasremoval.fraction
              [default = 0.8].

       --bsremove-xorder <int>
              Order of X polynomial fit (CURVE method only) (int; default: 1). The full name of this option  for
              the EsoRex configuration file is giraffe.biasremoval.xorder [default = 1].

       --bsremove-yorder <int>
              Order  of Y polynomial fit (CURVE method only) (int; default: 1). The full name of this option for
              the EsoRex configuration file is giraffe.biasremoval.yorder [default = 1].

       --bsremove-xstep <int>
              Sampling step along X (CURVE method only) (int; default: 1). The full name of this option for  the
              EsoRex configuration file is giraffe.biasremoval.xstep [default = 1].

       --bsremove-ystep <int>
              Sampling  step along Y (CURVE method only) (int; default: 1). The full name of this option for the
              EsoRex configuration file is giraffe.biasremoval.ystep [default = 1].

       --extr-method <str>
              Extraction method: ´SUM´, ´HORNE´ or ´OPTIMAL´ (str; default: ´SUM´). The full name of this option
              for the EsoRex configuration file is giraffe.extraction.method [default = SUM].

       --extr-ron <float>
              New bias sigma (RON) value for bias and dark corrected image (float; default: -1.0). The full name
              of this option for the EsoRex configuration file is giraffe.extraction.ron [default = -1.0].

       --extr-psfmodel <str>
              PSF profile model: `psfexp´, `psfexp2´ (str; default: ´psfexp2´). The full name of this option for
              the EsoRex configuration file is giraffe.extraction.psf.model [default = psfexp2].

       --extr-psfsigma <float>
              Sigma clippging threshold used for rejecting data points during PSF fitting (Horne´s sigma). It is
              used to reject bad pixels and cosmics.  (float; default: 7.0). The full name of  this  option  for
              the EsoRex configuration file is giraffe.extraction.psf.sigma [default = 7.0].

       --extr-psfniter <int>
              Maximum number of iterations used for fitting the PSF profile. (int; default: 2). The full name of
              this option for the EsoRex configuration file is giraffe.extraction.psf.iterations [default = 2].

       --extr-hewidth <int>
              Horne extraction method: Number of extra pixels added to the fiber half-width. (int; default:  2).
              The    full    name    of    this    option    for    the    EsoRex    configuration    file    is
              giraffe.extraction.horne.extrawidth [default = 2].

       --extr-hmingood <int>
              Horne extraction method: Minimum number of points used for the profile  fit.  It  sets  the  lower
              limit of data points for the pixel rejection.  (int; default: 3). The full name of this option for
              the EsoRex configuration file is giraffe.extraction.horne.mingood [default = 3].

       --extr-omfrac <float>
              Optimal extraction method: Minimum fraction  of  the  data  points  used  for  fitting  the  fiber
              profiles. It sets the lower limit for the pixel rejection. (float; default: 0.9). The full name of
              this option for the EsoRex configuration file is  giraffe.extraction.optimal.fraction  [default  =
              0.9].

       --extr-owfactor <float>
              Optimal  extraction  method:  Factor  by  which  the  fiber PSF half width is multiplied. Adjacent
              spectra within this area are assumed to affect the  spectrum  being  extracted.  (float;  default:
              3.0).    The    full    name   of   this   option   for   the   EsoRex   configuration   file   is
              giraffe.extraction.optimal.wfactor [default = 3.0].

       --extr-obkgorder <int>
              Optimal extraction method: Order of the polynomial background model,  which  is  fitted  for  each
              wavelength  bin  along the spatial direction.  (int; default: 2). The full name of this option for
              the EsoRex configuration file is giraffe.extraction.optimal.bkgorder [default = 2].

       --flat-apply <bool>
              Controls the flat field correction. (bool; default: False). The full name of this option  for  the
              EsoRex configuration file is giraffe.flat.apply [default = False].

       --transmission-apply <bool>
              Controls the fiber to fiber transmission correction. (bool; default: False). The full name of this
              option for the EsoRex configuration file is giraffe.flat.transmission [default = False].

       --rbin-method <str>
              Method to use : `linear´ or `spline´ (str; default: ´linear´). The full name of  this  option  for
              the EsoRex configuration file is giraffe.rebinning.method [default = linear].

       --rbin-xresid <bool>
              Use  x  residuals  during  rebinning?  `true´/`false´ (bool; default: True). The full name of this
              option for the EsoRex configuration file is giraffe.rebinning.xresiduals [default = True].

       --rbin-lstep <float>
              Lambda step size, only used if scaling method is ´linear´ (float; default: 0.005). The  full  name
              of this option for the EsoRex configuration file is giraffe.rebinning.lstep [default = 0.005].

       --rbin-scmethod <str>
              Scaling  method:  `log´ or `linear´ (str; default: ´linear´). The full name of this option for the
              EsoRex configuration file is giraffe.rebinning.scalemethod [default = linear].

       --rbin-size <int>
              Size of output rebinned spectra, 0 means calculate size  based  on  wavelength  range  and  lambda
              stepsize  (int;  default:  0).  The  full name of this option for the EsoRex configuration file is
              giraffe.rebinning.size [default = 0].

       --rbin-range <str>
              Rebinning range: `setup´ or `common´ (str; default: ´common´). The full name of  this  option  for
              the EsoRex configuration file is giraffe.rebinning.range [default = common].

       --recon-min <float>
              Minimum  wavelength  for  image reconstruction (float; default: 0.0). The full name of this option
              for the EsoRex configuration file is giraffe.fov.range.minimum [default = 0.0].

       --recon-max <float>
              Maximum wavelength for image reconstruction (float; default: 0.0). The full name  of  this  option
              for the EsoRex configuration file is giraffe.fov.range.maximum [default = 0.0].

       --recon-cube <bool>
              Turns  data  cube  creation on and off (bool; default: True). The full name of this option for the
              EsoRex configuration file is giraffe.fov.cube [default = True].

       --recon-format <str>
              Selects the file format for cubes (str; default: ´single´). The full name of this option  for  the
              EsoRex configuration file is giraffe.fov.cube.format [default = single].

       --flx-skycorr <bool>
              Correct  spectra for the sky emission (bool; default: False). The full name of this option for the
              EsoRex configuration file is giraffe.fxcalibration.sky.correct [default = False].

       --max-dist <float>
              Standar star search radius  (float; default: 60.0). The full name of this option  for  the  EsoRex
              configuration file is giraffe.fxcalibration.max.dist [default = 60.0].

       Note  that  it  is  possible to create a configuration file containing these options, along with suitable
       default values. Please refer to the details provided by the 'esorex --help' command.

SEE ALSO

       The full documentation for the giraf pipeline can be downloaded as a PDF file using the following URL:

              ftp://ftp.eso.org/pub/dfs/pipelines/giraffe/giraf-pipeline-manual-2.11.pdf

       An   overview   over   the   existing   ESO   pipelines    can    be    found    on    the    web    page
       https://www.eso.org/sci/software/pipelines/.

       Basic documentation about the EsoRex program can be found at the esorex (1) man page.

       It   is   possible   to   call   the   pipelines   from   python   using  the  python-cpl  package.   See
       https://packages.python.org/python-cpl/index.html for further information.

       The  other  recipes  of  the  giraf  pipeline  are  giframestack(7),  gimasterbias(7),   gimasterdark(7),
       gimasterflat(7), giscience(7), giwavecalibration(7)

VERSION

       gistandard 2.16.10

AUTHOR

       Giraffe Pipeline <https://support.eso.org/>

BUG REPORTS

       Please  report  any problems to https://support.eso.org/. Alternatively, you may send a report to the ESO
       User Support Department <usd-help@eso.org>.

LICENSE

        This file is part of the GIRAFFE Instrument Pipeline
        Copyright (C) 2002-2014 European Southern Observatory

        This program is free software; you can redistribute it and/or modify
        it under the terms of the GNU General Public License as published by
        the Free Software Foundation; either version 2 of the License, or
        (at your option) any later version.

        This program is distributed in the hope that it will be useful,
        but WITHOUT ANY WARRANTY; without even the implied warranty of
        MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
        GNU General Public License for more details.

        You should have received a copy of the GNU General Public License
        along with this program; if not, write to the Free Software
        Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA