NAME

       cnv_expression_correlate.py  -  Calculate correlation coefficients for gene expression and
       copy number

DESCRIPTION

       usage: cnv_expression_correlate.py [-h] [-o FILE] CNV_FILE RNA_FILE

       Calculate correlation coefficients for gene expression and copy number.  Data  source  for
       both inputs is TCGA via cBioPortal.

   positional arguments:
       CNV_FILE
              Gene copy number calls for many samples.

       RNA_FILE
              Gene expression for many samples (mostly overlapping with CNV samples).

   options:
       -h, --help
              show this help message and exit

       -o FILE, --output FILE
              Output file name (summary table).

AUTHOR

        This manpage was written by Andreas Tille for the Debian distribution and
        can be used for any other usage of the program.