Provided by: cpl-plugin-uves-doc_6.1.8+dfsg-2build3_all 
NAME
flames_cal_prep_sff_ofpos - Determines order and fibre postions
SYNOPSIS
esorex flames_cal_prep_sff_ofpos [OPTIONS] FILE.sof
DESCRIPTION
Fibre & order position determination procedure: You should feed the recipe with: - even,
odd, all fibre images (FIB_FF_EVEN_RED, FIB_FF_ODD_RED, FIB_FF_ALL_RED) - single fibre
images, FIB_ORDEF_(REDL|REDU) - master bias frames, MASTER_BIAS_(REDL|REDU) - master slit
flatfield frames, MASTER_SFLAT_(REDL|REDU) - order guess tables, FIB_ORD_GUE_(REDL|REDU).
Products are: - Fibre order table (FIB_ORDEF_TABLE_chip) - All fibre info table
(FIB_FF_ALL_INFO_TAB) - Odd fibre info table (FIB_FF_ODD_INFO_TAB) - Even fibre info table
(FIB_FF_EVEN_INFO_TAB) - Slit flatfield common (SLIT_FF_COM_chip) - Slit flatfield norm
(SLIT_FF_NOR_chip) - Slit flatfield data (SLIT_FF_DTC_chip) - Slit flatfield sigma
(SLIT_FF_SGC_chip) - Slit flatfield bad pixel (SLIT_FF_BPC_chip) - Slit flatfield boundary
(SLIT_FF_BNC_chip) - Fibre flatfield common (FIB_FF_COM_chip) - Fibre flatfield norm
(FIB_FF_NOR_chip) - Fibre flatfield norm sigma (FIB_FF_NSG_chip) chip=REDL and REDU
OPTIONS
--bias_method <str>
Bias subtraction method, M for master bias frame, N for no bias subtraction, V to
subtract a constant bias level defined by the parameter bias_value (str; default:
´M´). The full name of this option for the EsoRex configuration file is
flames_cal_prep_sff_ofpos.bias_method [default = M].
--bias_value <int>
Bias value (only if bias_method = V) (int; default: 200). The full name of this
option for the EsoRex configuration file is flames_cal_prep_sff_ofpos.bias_value
[default = 200].
--clean_tmp_products <bool>
Input data format (bool; default: False). The full name of this option for the
EsoRex configuration file is flames_cal_prep_sff_ofpos.clean_tmp_products [default
= False].
--cubify <bool>
Cubify switch (bool; default: True). The full name of this option for the EsoRex
configuration file is flames_cal_prep_sff_ofpos.cubify [default = True].
--debug <bool>
Whether or not to save intermediate results to local directory (bool; default:
False). The full name of this option for the EsoRex configuration file is
uves.debug [default = False].
--ext_method <str>
Extraction method (str; default: ´opt´). The full name of this option for the
EsoRex configuration file is flames_cal_prep_sff_ofpos.ext_method [default = opt].
--fileprep <bool>
Slitff* and Fibreff* file preparation. If fast extraction method is used it should
be set to FALSE (bool; default: True). The full name of this option for the EsoRex
configuration file is flames_cal_prep_sff_ofpos.fileprep [default = True].
--filter_switch <str>
Filter switch (str; default: ´none´). The full name of this option for the EsoRex
configuration file is flames_cal_prep_sff_ofpos.filter_switch [default = none].
--plotter <str>
Any plots produced by the recipe are redirected to the command specified by this
parameter. The plotting command must contain the substring ´gnuplot´ and must be
able to parse gnuplot syntax on its standard input. Valid examples of such a
command may include ´gnuplot -persist´ and ´cat > mygnuplot$$.gp´. A finer control
of the plotting options can be obtained by writing an executable script, e.g.
my_gnuplot.pl, that executes gnuplot after setting the desired gnuplot options
(e.g. set terminal pslatex color). To turn off plotting, set this parameter to ´no´
(str; default: ´no´). The full name of this option for the EsoRex configuration
file is uves.plotter [default = no].
--process_chip <str>
For RED arm data process the redl, redu, or both chip(s) (str; default: ´both´).
The full name of this option for the EsoRex configuration file is uves.process_chip
[default = both].
--sat_thr <int>
Saturation threshold (int; default: 55000). The full name of this option for the
EsoRex configuration file is flames_cal_prep_sff_ofpos.sat_thr [default = 55000].
--save_flat_size <int>
To be sure to use the flat part of a slit flatsone may need to subtract this bit.
The default value -1, is used for automatic setting: if WCEN=520 save_flat_size=0,
else save_flat_size=2. Values explicitly set by user overwrite this rule. (int;
default: -1). The full name of this option for the EsoRex configuration file is
flames_cal_prep_sff_ofpos.save_flat_size [default = -1].
Note that it is possible to create a configuration file containing these options, along
with suitable default values. Please refer to the details provided by the 'esorex --help'
command.
SEE ALSO
The full documentation for the uves pipeline can be downloaded as a PDF file using the
following URL:
ftp://ftp.eso.org/pub/dfs/pipelines/uves/uves-pipeline-manual-6.1.8.pdf
An overview over the existing ESO pipelines can be found on the web page
https://www.eso.org/sci/software/pipelines/.
Basic documentation about the EsoRex program can be found at the esorex (1) man page.
It is possible to call the pipelines from python using the python-cpl package. See
https://packages.python.org/python-cpl/index.html for further information.
The other recipes of the uves pipeline are flames_cal_mkmaster(7), flames_cal_orderpos(7),
flames_cal_predict(7), flames_cal_wavecal(7), flames_obs_redchain(7),
flames_obs_scired(7), flames_utl_unpack(7), uves_cal_cd_align(7), uves_cal_mbias(7),
uves_cal_mdark(7), uves_cal_mflat(7), uves_cal_mflat_combine(7), uves_cal_mkmaster(7),
uves_cal_orderpos(7), uves_cal_predict(7), uves_cal_response(7), uves_cal_tflat(7),
uves_cal_wavecal(7), uves_obs_redchain(7), uves_obs_scired(7), uves_utl_ima_arith(7),
uves_utl_remove_crh_single(7)
VERSION
flames_cal_prep_sff_ofpos 6.1.8
AUTHOR
Jonas M. Larsen <cpl@eso.org>
BUG REPORTS
Please report any problems to cpl@eso.org. Alternatively, you may send a report to the ESO
User Support Department <usd-help@eso.org>.
LICENSE
This file is part of the FLAMES/UVES Pipeline Copyright (C) 2004, 2005, 2006, 2007
European Southern Observatory
This program is free software; you can redistribute it and/or modify it under the terms of
the GNU General Public License as published by the Free Software Foundation; either
version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program;
if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
MA 02111-1307 USA