NAME

       destripe - Destripe volume image data.

SYNOPSIS

       destripe InputImage OutputImage

DESCRIPTION

       This  program  corrects  stripe  artifacts  in  acquired image stacks which can result from between-slice
       intensity scale differences.

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Slice Orientation
       --slice-axis
            Define slice direction axis: this is the through-slice  direction  of  the  acquisition.   Supported
            values:  "guess-from-input",  "axial", "sagittal", "coronal", "slice-x", "slice-y", "slice-z", where
            the default is "guess-from-input", or use one of the following:

            --guess-from-input
                 Guess from input image [This is the default]

            --axial, -a
                 Sliced axial images

            --sagittal, -s
                 Sliced sagittal images

            --coronal, -c
                 Sliced coronal images

            --slice-x, -x
                 Sliced along x axis

            --slice-y, -y
                 Sliced along y axis

            --slice-z, -z
                 Sliced along z axis

       --kernel-fwhm <double>
            Gaussian kernel full width at half maximum (FWHM) in units of slice indexes.  [Default: 1]

       --kernel-radius <integer>
            Truncate kernel radius to this many samples.  By  default,  kernel  width  is  determined  to  limit
            approximation error.  [Default: 0]

       --write-float
            Write  output image in floating point representation. By default, write using input image pixel data
            type.

AUTHORS

       Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R.  Maurer,  Daniel  B.
       Russakoff, and Yaroslav Halchenko

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       CMTK  is  developed  with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and
       Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through  September
       2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.

CMTK 3.3.1p2                                       Feb 26 2025                                       destripe(1)