NAME

       pxlstr - print tree summary

SYNOPSIS

       pxlstr [OPTIONS]...

DESCRIPTION

       Print  tree  summary.  By default returns all properties. Alternatively choose 1 property.
       This will take a newick- or nexus-formatted tree from a file or STDIN.

OPTIONS

       -t, --treef=FILE
              input tree file, STDIN otherwise

       -r, --rooted
              return whether the tree is rooted

       -a, --age
              return the height of root (must be rooted and ultrametric)

       -n, --ntips
              return the number of terminals

       -u, --ultrametric
              return whether tree is ultrametric

       -b, --binary
              return whether tree is binary

       -l, --length
              return the length of the tree

       -i, --tiplabels
              return all tip labels (one per line)

       -v, --rtvar
              return root-to-tip variance

       -o, --outf=FILE
              output tree stats file, STOUT otherwise

       -h, --help
              display this help and exit

       -V, --version
              display version and exit

       -C, --citation
              display phyx citation and exit

CITATION

       Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx:  phylogenetic  tools
       for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.

AUTHOR

       Written by Joseph W. Brown

REPORTING BUGS

       Report    bugs    to:    <https://github.com/FePhyFoFum/phyx/issues>   phyx   home   page:
       <https://github.com/FePhyFoFum/phyx>

COPYRIGHT

       Copyright © 2016-2024 FePhyFoFum License: GPLv3