NAME

       pxsstat - calculate multinomial alignment test statistics

SYNOPSIS

       pxsstat [OPTIONS]...

DESCRIPTION

       Calculates  multinomial  alignment  test  statistics.   Currently only calculates the test
       statistic from Bollback (2002) MBE.  This  will  take  fasta,  fastq,  phylip,  and  nexus
       formats from a file or STDIN.

OPTIONS

       -s, --seqf=FILE
              input seq file, STDIN otherwise

       -o, --outf=FILE
              output sequence file, STOUT otherwise

       -h, --help
              display this help and exit

       -V, --version
              display version and exit

       -C, --citation
              display phyx citation and exit

CITATION

       Brown,  Joseph  W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools
       for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.

AUTHOR

       Written by Joseph W. Brown

REPORTING BUGS

       Report   bugs   to:   <https://github.com/FePhyFoFum/phyx/issues>    phyx    home    page:
       <https://github.com/FePhyFoFum/phyx>

COPYRIGHT

       Copyright © 2017-2024 FePhyFoFum License GPLv3