NAME

       pxupgma - UPGMA tree generator

SYNOPSIS

       pxupgma [OPTIONS]...

DESCRIPTION

       Bare  bones  UPGMA  tree generator Currently only uses uncorrected p-distances.  This will
       take fasta, fastq, phylip, and nexus formats from a file or STDIN.

OPTIONS

       -s, --seqf=FILE
              input sequence file, STDIN otherwise

       -o, --outf=FILE
              output newick file, STOUT otherwise

       -h, --help
              display this help and exit

       -V,  --version
              display version and exit

       -C, --citation
              display phyx citation and exit

CITATION

       Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx:  phylogenetic  tools
       for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.

AUTHOR

       Written by Joseph W. Brown, Joseph F. Walker

REPORTING BUGS

       Report    bugs    to:    <https://github.com/FePhyFoFum/phyx/issues>   phyx   home   page:
       <https://github.com/FePhyFoFum/phyx>

COPYRIGHT

       Copyright © 2015-2021 FePhyFoFum License GPLv3