NAME

       seqmatchall - All-against-all word comparison of a sequence set

SYNOPSIS

       seqmatchall -sequence seqset -wordsize integer -outfile align

       seqmatchall -help

DESCRIPTION

       seqmatchall is a command line program from EMBOSS (“the European Molecular Biology Open
       Software Suite”). It is part of the "Alignment:Local" command group(s).

OPTIONS

   Input section
       -sequence seqset

   Required section
       -wordsize integer
           Default value: 4

   Output section
       -outfile align

BUGS

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or
       directly to the EMBOSS developers
       (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

       seqmatchall is fully documented via the tfm(1) system.

AUTHOR

       Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

COPYRIGHT

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package.
       It can be redistributed under the same terms as EMBOSS itself.