Provided by: libvcflib-tools_1.0.9+dfsg1-3build1_amd64 bug

NAME
       vcfevenregions


SYNOPSIS
       vcfevenregions options


DESCRIPTION
       Generates  a  list  of  regions,  e.g. chr20:10..30  using the variant density information
       provided in the VCF file to ensure that the regions have even numbers of  variants.   This
       can be use to reduce the variance in runtime when dividing variant detection or genotyping
       by genomic coordinates.


OPTIONS
              options:
                  -f, --fasta-reference REF    FASTA reference file to use to obtain primer sequences.
                  -n, --number-of-regions N    The number of desired regions.
                  -p, --number-of-positions N  The number of positions per region.
                  -o, --offset N               Add an offset to region positioning, to avoid boundary
                                               related artifacts in downstream processing.
                  -l, --overlap N              The number of sites to overlap between regions.  Default 0.
                  -s, --separator SEQ          Specify string to use to separate region output.  Default '-'

              Type: transformation


EXIT VALUES
       0      Success

       not 0  Failure


SEE ALSO
       vcflib(1)


OTHER
LICENSE
       Copyright 2011-2023 (C) Erik Garrison and vcflib contributors.  MIT licensed.


AUTHORS
       Erik Garrison and vcflib contributors.