NAME

       rampler - module for sampling genomic sequences

DESCRIPTION

       usage: rampler [options ...] <mode>

   <mode>
   subsample <sequences> <reference length> <coverage> [<coverage> ...]

       <sequences>

              input  file  in  FASTA/FASTQ  format  (can  be  compressed  with  gzip) containing sequences to be
              subsampled

       <reference length>

              integer denoting length of the reference genome (or assembly) from which the sequences originate

       <coverage>

              integer denoting desired coverage of the subsampled sequences

   split <sequences> <chunk size>

       <sequences>

              input file in FASTA/FASTQ format (can be compressed with gzip) containing sequences which will  be
              split into smaller chunks

       <chunk size>

              integer denoting the desired chunk size in bytes

OPTIONS

       -o, --out-directory

              default: current directory path in which sampled files will be created

       --version

              prints the version number

       -h, --help

              prints the usage

AUTHOR

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

rampler 1.1.0                                       June 2018                                         RAMPLER(1)