NAME

       scrappie - basecaller for Nanopore sequencer

DESCRIPTION

       Scrappie  is  a  technology demonstrator for the Oxford Nanopore Technologies Limited Research Algorithms
       group.

       Basic usage: * scrappie events        Base call from event based data.  *  scrappie  help           Print
       general  help  or  help  about  specific  Scrappie  command.   *  scrappie  licence       Print licensing
       information.  *  scrappie  raw            Base  call  directly  from  raw  signal.   *  scrappie  version
       Print  version information.  * scrappie squiggle      Create approximate squiggle for sequence * scrappie
       mappy         Map signal to approximate squiggle * scrappie seqmappy       Map  signal  to  sequence  via
       basecall posteriors * scrappie event_table   Output table of events for read

       This  project  began life as a proof (bet) that a base caller could be written in a low level language in
       under 8 hours.  Some of  the  poor  and  just  plain  odd  design  decisions,  along  with  the  lack  of
       documentation,  are  a result of its inception. In keeping with ONT's fish naming policy, the project was
       originally called Crappie.

       Scrappie's purpose is to demonstrate the next generation  of  base  calling  and,  as  such,  may  change
       drastically  between  releases  and  breaks  backwards compatibility.  Newer versions may drop support of
       current features or change their behaviour.

AUTHOR

        This manpage was written by Nilesh Patra for the Debian distribution and
        can be used for any other usage of the program.

scrappie 1.4.2                                    October 2020                                       SCRAPPIE(1)