NAME

       graphdump - build the compacted de Bruijn graph from many complete genomes

DESCRIPTION

       USAGE:

       graphdump
              -k <integer> [-s <>] ... -f <seq|group|dot|gfa1|gfa2|fasta> [--prefix] [--] [--version] [-h] <file
              name>

       Where:

       -k <integer>,  --kvalue <integer>

       (required)
              Value of k

       -s <>,  --seqfile <>
              (accepted multiple times)

              sequences file name

       -f <seq|group|dot|gfa1|gfa2|fasta>,  --format <seq|group|dot|gfa1|gfa2

              |fasta>

       (required)
              Output format

       --prefix

              Add a prefix to segments in GFA (in case if you have genomes with identical FASTA headers)

       --,  --ignore_rest

              Ignores the rest of the labeled arguments following this flag.

       --version

              Displays version information and exits.

       -h,  --help

              Displays usage information and exits.

              <file name>

       (required)
              input file name

              This utility converts the binary output of TwoPaCo to another format

AUTHOR

        This manpage was written by Andrius Merkys for the Debian distribution and
        can be used for any other usage of the program.

graphdump 1.0.0                                  September 2022                                     GRAPHDUMP(1)