Provided by: libvcflib-tools_1.0.12+dfsg-1_amd64 bug

NAME
       segmentIhs


SYNOPSIS
       segmentFst -s 2 -f iHS.normalized.output.txt


DESCRIPTION
       Creates genomic segments (bed file) for regions with high wcFst


OPTIONS
              Output : 8 columns :
                   1. Seqid
                   2. Start (zero based)
                   3. End   (zero based)
                   4. Average iHS
                   5. Average high Fst (iHS > -s)
                   6. N iHS values in segment
                   7. N high iHS values in segment
                   8. Segment length
              required: -f            -- Output from normalizeIHS
              optional: -s            -- High absolute iHS cutoff [2]

              Type: statistics


EXIT VALUES
       0      Success

       not 0  Failure


SEE ALSO
       vcflib(1)


OTHER
LICENSE
       Copyright  2011-2024  (C)  Erik Garrison and vcflib contributors.  MIT licensed.  Copyright 2020-2024 (C)
       Pjotr Prins.


AUTHORS
       Erik Garrison and vcflib contributors.

segmentIhs (vcflib)                                                                                SEGMENTIHS(1)