NAME

       tff_visualize_overlap.py - display a tractogram and its density map

DESCRIPTION

       usage: tff_visualize_overlap.py [-h] [--remove_invalid]

              IN_TRACTOGRAM reference

       Display  a  tractogram  and  its  density map (computed from Dipy) in rasmm, voxmm and vox space with its
       bounding box.

   positional arguments:
       IN_TRACTOGRAM
              Tractogram filename. Format must be one of trk, tck, vtk, fib, dpy, trx.

       reference
              Reference anatomy for tck/vtk/fib/dpy file support (nii or nii.gz).

   options:
       -h, --help
              show this help message and exit

       --remove_invalid
              Removes invalid streamlines to avoid the density_mapfunction to crash.

tff_visualize_overlap.py 0.3                     September 2025                      TFF_VISUALIZE_OVERLAP.PY(1)