NAME

       transformix - manual page for transformix version: 5.2.0

DESCRIPTION

       transformix version: 5.2.0

       transformix applies a transform on an input image and/or generates a deformation field.  The transform is
       specified in the transform-parameter file.

       --help, -h displays this message and exit

       --version
              output version information and exit

   Call transformix from the command line with mandatory arguments:
       -out   output directory

       -tp    transform-parameter file, only 1

   Optional extra commands:
       -in    input image to deform

       -def   file  containing  input-image  points;  the  point  are  transformed  according  to  the specified
              transform-parameter file use "-def all" to  transform  all  points  from  the  input-image,  which
              effectively generates a deformation field.

       -jac   use "-jac all" to generate an image with the determinant of the spatial Jacobian

       -jacmat
              use "-jacmat all" to generate an image with the spatial Jacobian matrix at each voxel

       -loglevel set the log level to "off", "error", "warning", or "info" (default),

       -priority set the process priority to high, abovenormal, normal (default),

              belownormal, or idle (Windows only option)

       -threads
              set the maximum number of threads of transformix

       At least one of the options "-in", "-def", "-jac", or "-jacmat" should be given.

       The  transform-parameter file must contain all the information necessary for transformix to run properly.
       That includes which transform to use, with which parameters, etc. For a usable transform-parameter  file,
       run elastix, and inspect the output file "TransformParameters.0.txt".

   Need further help? Please check:
              *    the   elastix   website:   https://elastix.dev   *   the   source   code   repository   site:
              https://github.com/SuperElastix/elastix         *          the          discussion          forum:
              https://groups.google.com/g/elastix-imageregistration

transformix version: 5.2.0                        January 2025                                    TRANSFORMIX(1)