trusty (1) ClusterImageStatistics.1.gz

NAME

       ClusterImageStatistics - part of ANTS registration suite

DESCRIPTION

              Given  an  ROI and Label Image, find the max and average value in a value image  where the value >
              some user-defined threshold and the cluster size  is larger than some min size.

       Usage:

       ./ClusterImageStatistics   ImageDimension  ROIMask.ext  LabelImage.ext   OutPrefix     MinimumClusterSize
       ValueImageThreshold  Image1WithValuesOfInterest.ext ...  ImageNWithValuesOfInterest.ext

              ROIMask.ext -- overall region of interest

       LabelImage.ext -- labels for the sub-regions, e.g. Brodmann or just unique labels (see
              LabelClustersUniquely )

       OutputPrefix -- all output
              has this prefix

              MinimumClusterSize -- the minimum size of clusters of interest

              ValueImageThreshold -- minimum value of interest

       Image*WithValuesOfInterest.ext
              ---  image(s) that define the values you want to measure