Provided by: python-biom-format_1.1.2-1_amd64 bug

NAME

       biom_validator - Test a biom file for adherence to the format specification

SYNOPSIS

       biom_validator [options] {-i/--biom_fp BIOM_FP}

DESCRIPTION

       []  indicates  optional  input  (order  unimportant)  {}  indicates  required input (order
       unimportant)

       Test a biom file for adherence to the format specification. This specification is  defined
       at http://biom-format.org.

       Example usage: Print help message and exit

              biom_validator -h

       Validate the my_data.biom file.

              biom_validator -i my_data.biom

OPTIONS

       --version
              show program's version number and exit

       -h, --help
              show this help message and exit

       -v, --verbose
              Print information during execution -- useful for debugging [default: False]

       -f FORMAT_VERSION, --format-version=FORMAT_VERSION
              The  specific  format  string,  defaults to [default: Biological Observation Matrix
              1.0.0]

              REQUIRED options:

              The following options must be provided under all circumstances.

       -i BIOM_FP, --biom_fp=BIOM_FP
              the BIological Observation Matrix filepath to validate [REQUIRED]