Provided by: bioperl_1.6.923-1_all
NAME
bp_generate_histogram.pl -- Generate a histogram of Bio::DB::GFF features
SYNOPSIS
bp_generate_histogram.pl -d gadfly variation gene:curated
DESCRIPTION
Use this utility to generate feature density histograms from Bio::DB::GFF databases. The result is a GFF data file that is suitable for loading with load_gff.pl. OPTIONS The following options are recognized: Option Description ------ ----------- --dsn <dsn> Data source (default dbi:mysql:test) --adaptor <adaptor> Schema adaptor (default dbi::mysqlopt) --user <user> Username for mysql authentication --pass <password> Password for mysql authentication --aggregator <list> Comma-separated list of aggregators
BUGS
Please report them.
SEE ALSO
Bio::DB::GFF
AUTHOR
Lincoln Stein <lstein@cshl.org> Copyright (c) 2001 Cold Spring Harbor Laboratory This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty.