NAME

       xform2itk - Convert affine transformations to ITK format.

SYNOPSIS

       xform2itk InputPath OutputPath

DESCRIPTION

       This  tool  converts coordinate transformations from CMTK format to ITK format and, in the
       process, also correct for differences in image coordinate conventions

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Input parameters
       --fixed-space <string>
            Change fixed image coordinate space (e.g., 'RAS', 'LPS', ...). This defaults  to  ITK
            standard space.  [Default: LPS ]

       --moving-space <string>
            Change  moving image coordinate space (e.g., 'RAS', 'LPS', ...). This defaults to ITK
            standard space.  [Default: LPS ]

       --invert-input
            Invert input transformation before conversion

   Output parameters
       --fixed-image <string>
            Override transformation's fixed/reference image (if any) with  this  one.   [Default:
            NONE]

       --moving-image <string>
            Override  transformation's  moving/floating  image (if any) with this one.  [Default:
            NONE]

AUTHORS

       Torsten Rohlfing, with contributions from Michael  P.  Hasak,  Greg  Jefferis,  Calvin  R.
       Maurer, Daniel B. Russakoff, and Yaroslav Halchenko

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on
       Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data  Integration  Component.  From
       April  2009  through September 2011, CMTK development and maintenance was supported by the
       NIBIB under Grant EB008381.