Provided by: emboss_6.6.0-1_amd64
NAME
dbshowdat - Show possible database queries that return a given data type
SYNOPSIS
dbshowdat -datatype string -database string -identifier string [-outfile outfile] [-html boolean] dbshowdat -help
DESCRIPTION
dbshowdat is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Information" command group(s).
OPTIONS
Input section -datatype string This is the name of a retrievable datatype from the catalogue of public databases in the EMBOSS data file DRCAT.dat. The names are terms from the 'data' branch of the EDAM ontology, http://edamontology.sourceforge.net/. If you are unsure of the available retrievable datatypes for a given database, use dbtellquery. If you have a datatype name but are not sure its valid, use isdbdata. Required section Additional section Advanced section -database string This is the name of a database from the catalogue of public databases in the EMBOSS data file DRCAT.dat. If you are unsure of the available databases use dbfind. If you have a database name but are not sure its valid, use isdbname. -identifier string This is a data identifier (e.g. a sequence accession number) that is used to specify the data (of type 'datatype') to retrieve. If you're unsure of the data identifier(s) that are used for a given query (database/datatype) use dbtellquery. The types of data identifier are listed under the 'Data identifier' branch of the EDAM ontology (http://edamontology.sourceforge.net/). For example values, see the catalogue of public databases in the EMBOSS data file DRCAT.dat. If you have a data identifier but are unsure of its type, use idtell. Output section -outfile outfile Default value: stdout Html section -html boolean If you are sending the output to a file, this will format it for displaying as a table in a WWW document. Default value: N
BUGS
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
SEE ALSO
dbshowdat is fully documented via the tfm(1) system.
AUTHOR
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Wrote the script used to autogenerate this manual page.
COPYRIGHT
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.