NAME

       fastaselect - select fasta sequences in a file

DESCRIPTION

       This  script  selects  fasta  sequences in a file according to names given in a name file.
       Given a FASTA file (and possibly a FASTA quality file) and a file  with  names  of  reads,
       select  the sequences from the input FASTA (and quality file) and writes them to an output
       FASTA.

       If fasta quality file is present (same basename,  but  with  .qual  appended),  then  also
       selects sequences from there.

       Please check out the documentation below for more detailed information.

SYNOPSIS

       fastaselect <options>

OPTIONS

       -infile
              name   filename containing all fasta sequences

       -name  name   filename containing all names of sequences to select

       -outfile name
              filename where to write selcted sequences to

SEE ALSO

       fastqselect(1)

       A  more  extensive  documentation  is provided in the mira-doc package and can be found at
       /usr/share/doc/mira-assembler/DefinitiveGuideToMIRA.html.

       You can also subscribe one of the MIRA mailing lists at

              http://www.chevreux.org/mira_mailinglists.html

       After subscribing, mail general questions to the MIRA talk mailing list:

              mira_talk@freelists.org

BUGS

       To report bugs or ask for features, please use the new ticketing system at:

              http://sourceforge.net/apps/trac/mira-assembler/

AUTHOR

       The author of the mira code is Bastien Chevreux <bach@chevreux.org>

       This manual page was written by Andreas Tille <tille@debian.org> but can  be  freely  used
       for any other distribution.