NAME

       fastautils - FASTA format file manipulation utilities

SYNOPSIS

       fastachecksum [ options ] <input file>

       fastaclean

       fastaclip

       fastacomposition

       fastadiff

       fastaexplode

       fastafetch

       fastahardmask

       fastaindex

       fastalength

       fastanrdb

       fastaoverlap

       fastareformat

       fastaremove

       fastarevcomp

       fastasoftmask

       fastasort

       fastasplit

       fastasubseq

       fastatranslate

       fastavalidcds

DESCRIPTION

       These  are  utilities  for the manipulation of FASTA format sequence databases which are distributed with
       the exonerate sequence alignment program.

ENVIRONMENT

       Not documented yet.

EXAMPLES

       fastalength sequence.fasta
              blah blah

VERSION

       This documentation accompanies version 2.2.0 of the exonerate package.

AUTHOR

       Guy St.C. Slater.  <guy@ebi.ac.uk>.  See the AUTHORS file accompanying the source  code  for  a  list  of
       contributors.

AVAILABILITY

       This  source  code  for  the  exonerate  package  is  available under the terms of the GNU general public
       licence.

       Please    see    the    file    COPYING    which    was    distrubuted    with    this    package,     or
       http://www.gnu.org/licenses/gpl.txt for details.

       This  package  has been developed as part of the ensembl project.  Please see http://www.ensembl.org/ for
       more information.

SEE ALSO

       exonerate(1),e-PCR

fastautils                                         March 2003                                      fastautils(1)