Provided by: gmt_4.5.11-1build1_amd64 
NAME
greenspline - Interpolate 1-D, 2-D, 3-D Cartesian or spherical surface data using Green's
function splines.
SYNOPSIS
greenspline [ datafile(s) ] [ -A[1|2|3|4|5,]gradfile ] [ -Ccut[/file] ] [ -Dmode ] [ -F ]
[ -Ggrdfile ] [ -H[i][nrec] ] [ -Ixinc[yinc[zinc]] ] [ -L ] [ -Nnodefile ] [ -Qaz|x/y/z ]
[ -Rxmin/xmax[/ymin/ymax[/zminzmax]] ] [ -Sc|t|g|p|q[pars] ] [ -Tmaskgrid ] [ -V ] [
-:[i|o] ] [ -bi[s|S|d|D[ncol]|c[var1/...]] ] [ -f[i|o]colinfo ] [
-bo[s|S|d|D[ncol]|c[var1/...]] ]
DESCRIPTION
greenspline uses the Green's function G(x; x') for the chosen spline and geometry to
interpolate data at regular [or arbitrary] output locations. Mathematically, the solution
is composed as w(x) = sum {c(i) G(x; x(i))}, for i = 1, n, the number of data points
{x(i), w(i)}. Once the n coefficients c(i) have been found then the sum can be evaluated
at any output point x. Choose between ten minimum curvature, regularized, or continuous
curvature splines in tension for either 1-D, 2-D, or 3-D Cartesian coordinates or
spherical surface coordinates. After first removing a linear or planar trend (Cartesian
geometries) or mean value (spherical surface) and normalizing these residuals, the least-
squares matrix solution for the spline coefficients c(i) is found by solving the n by n
linear system w(j) = sum-over-i {c(i) G(x(j); x(i))}, for j = 1, n; this solution yields
an exact interpolation of the supplied data points. Alternatively, you may choose to
perform a singular value decomposition (SVD) and eliminate the contribution from the
smallest eigenvalues; this approach yields an approximate solution. Trends and scales are
restored when evaluating the output.
OPTIONS
datafile(s)
The name of one or more ASCII [or binary, see -bi] files holding the x, w data
points. If no file is given then we read standard input instead.
-A The solution will partly be constrained by surface gradients v = v*n, where v is
the gradient magnitude and n its unit vector direction. The gradient direction may
be specified either by Cartesian components (either unit vector n and magnitude v
separately or gradient components v directly) or angles w.r.t. the coordinate axes.
Specify one of five input formats: 0: For 1-D data there is no direction, just
gradient magnitude (slope) so the input format is x, gradient. Options 1-2 are for
2-D data sets: 1: records contain x, y, azimuth, gradient (azimuth in degrees is
measured clockwise from the vertical (north) [Default]). 2: records contain x, y,
gradient, azimuth (azimuth in degrees is measured clockwise from the vertical
(north)). Options 3-5 are for either 2-D or 3-D data: 3: records contain x,
direction(s), v (direction(s) in degrees are measured counter-clockwise from the
horizontal (and for 3-D the vertical axis). 4: records contain x, v. 5: records
contain x, n, v. Append name of ASCII file with the surface gradients (following a
comma if a format is specified).
-C Find an approximate surface fit: Solve the linear system for the spline
coefficients by SVD and eliminate the contribution from all eigenvalues whose ratio
to the largest eigenvalue is less than cut [Default uses Gauss-Jordan elimination
to solve the linear system and fit the data exactly]. Optionally, append /file to
save the eigenvalue ratios to the specified file for further analysis. Finally, if
a negative cut is given then /file is required and execution will stop after saving
the eigenvalues, i.e., no surface output is produced.
-D Sets the distance flag that determines how we calculate distances between data
points. Select mode 0 for Cartesian 1-D spline interpolation: -D 0 means (x) in
user units, Cartesian distances, Select mode 1-3 for Cartesian 2-D surface spline
interpolation: -D 1 means (x,y) in user units, Cartesian distances, -D 2 for (x,y)
in degrees, flat Earth distances, and -D 3 for (x,y) in degrees, spherical
distances in km. Then, if ELLIPSOID is spherical, we compute great circle arcs,
otherwise geodesics. Option mode = 4 applies to spherical surface spline
interpolation only: -D 4 for (x,y) in degrees, use cosine of great circle (or
geodesic) arcs. Select mode 5 for Cartesian 3-D surface spline interpolation: -D 5
means (x,y,z) in user units, Cartesian distances.
-F Force pixel registration. [Default is gridline registration].
-G Name of resulting output file. (1) If options -R, -I, and possibly -F are set we
produce an equidistant output table. This will be written to stdout unless -G is
specified. Note: for 2-D grids the -G option is required. (2) If option -T is
selected then -G is required and the output file is a 2-D binary grid file.
Applies to 2-D interpolation only. (3) If -N is selected then the output is an
ASCII (or binary; see -bo) table; if -G is not given then this table is written to
standard output. Ignored if -C or -C 0 is given.
-H Input file(s) has header record(s). If used, the default number of header records
is N_HEADER_RECS. Use -Hi if only input data should have header records [Default
will write out header records if the input data have them]. Blank lines and lines
starting with # are always skipped.
-I Specify equidistant sampling intervals, on for each dimension, separated by
slashes.
-L Do not remove a linear (1-D) or planer (2-D) trend when -D selects mode 0-3 [For
those Cartesian cases a least-squares line or plane is modeled and removed, then
restored after fitting a spline to the residuals]. However, in mixed cases with
both data values and gradients, or for spherical surface data, only the mean data
value is removed (and later and restored).
-N ASCII file with coordinates of desired output locations x in the first column(s).
The resulting w values are appended to each record and written to the file given in
-G [or stdout if not specified]; see -bo for binary output instead. This option
eliminates the need to specify options -R, -I, and -F.
-Q Rather than evaluate the surface, take the directional derivative in the az azimuth
and return the magnitude of this derivative instead. For 3-D interpolation,
specify the three components of the desired vector direction (the vector will be
normalized before use).
-R Specify the domain for an equidistant lattice where output predictions are
required. Requires -I and optionally -F.
1-D: Give xmin/xmax, the minimum and maximum x coordinates.
2-D: Give xmin/xmax/ymin/ymax, the minimum and maximum x and y coordinates. These
may be Cartesian or geographical. If geographical, then west, east, south, and
north specify the Region of interest, and you may specify them in decimal degrees
or in [+-]dd:mm[:ss.xxx][W|E|S|N] format. The two shorthands -Rg and -Rd stand for
global domain (0/360 and -180/+180 in longitude respectively, with -90/+90 in
latitude).
3-D: Give xmin/xmax/ymin/ymax/zmin/zmax, the minimum and maximum x, y and z
coordinates. See the 2-D section if your horizontal coordinates are geographical;
note the shorthands -Rg and -Rd cannot be used if a 3-D domain is specified.
-S Select one of five different splines. The first two are used for 1-D, 2-D, or 3-D
Cartesian splines (see -D for discussion). Note that all tension values are
expected to be normalized tension in the range 0 < t < 1: (c) Minimum curvature
spline [Sandwell, 1987], (t) Continuous curvature spline in tension [Wessel and
Bercovici, 1998]; append tension[/scale] with tension in the 0-1 range and
optionally supply a length scale [Default is the average grid spacing]. The next
is a 2-D or 3-D spline: (r) Regularized spline in tension [Mitasova and Mitas,
1993]; again, append tension and optional scale. The last two are spherical
surface splines and both imply -D 4 and geographic data: (p) Minimum curvature
spline [Parker, 1994], (q) Continuous curvature spline in tension [Wessel and
Becker, 2008]; append tension. The G(x; x') for the last method is slower to
compute; by specifying -SQ you can speed up calculations by first pre-calculating
G(x; x') for a dense set of x values (e.g., 100,001 nodes between -1 to +1) and
store them in look-up tables. Optionally append /N (an odd integer) to specify how
many points in the spline to set [100001]
-T For 2-D interpolation only. Only evaluate the solution at the nodes in the
maskgrid that are not equal to NaN. This option eliminates the need to specify
options -R, -I, and -F.
-V Selects verbose mode, which will send progress reports to stderr [Default runs
"silently"].
-bi Selects binary input. Append s for single precision [Default is d (double)].
Uppercase S or D will force byte-swapping. Optionally, append ncol, the number of
columns in your binary input file if it exceeds the columns needed by the program.
Or append c if the input file is netCDF. Optionally, append var1/var2/... to
specify the variables to be read. [Default is 2-4 input columns (x,w); the number
depends on the chosen dimension].
-f Special formatting of input and/or output columns (time or geographical data).
Specify i or o to make this apply only to input or output [Default applies to
both]. Give one or more columns (or column ranges) separated by commas. Append T
(absolute calendar time), t (relative time in chosen TIME_UNIT since TIME_EPOCH), x
(longitude), y (latitude), or f (floating point) to each column or column range
item. Shorthand -f[i|o]g means -f[i|o]0x,1y (geographic coordinates).
-bo Selects binary output. Append s for single precision [Default is d (double)].
Uppercase S or D will force byte-swapping. Optionally, append ncol, the number of
desired columns in your binary output file.
1-D EXAMPLES
To resample the x,y Gaussian random data created by gmtmath and stored in 1D.txt,
requesting output every 0.1 step from 0 to 10, and using a minimum cubic spline, try
gmtmath -T 0/10/1 0 1 NRAND = 1D.txt
psxy -R0/10/-5/5 -JX 6i/3i -B 2f1/1 -Sc 0.1 -G black 1D.txt -K > 1D.ps
greenspline 1D.txt -R 0/10 -I 0.1 -Sc -V | psxy -R -J -O -W thin >> 1D.ps
To apply a spline in tension instead, using a tension of 0.7, try
psxy -R0/10/-5/5 -JX 6i/3i -B 2f1/1 -Sc 0.1 -G black 1D.txt -K > 1Dt.ps
greenspline 1D.txt -R 0/10 -I 0.1 -St 0.7 -V | psxy -R -J -O -W thin >> 1Dt.ps
2-D EXAMPLES
To make a uniform grid using the minimum curvature spline for the same Cartesian data set
from Davis (1986) that is used in the GMT Cookbook example 16, try
greenspline table_5.11 -R 0/6.5/-0.2/6.5 -I 0.1 -Sc -V -D 1 -G S1987.grd
psxy -R0/6.5/-0.2/6.5 -JX 6i -B 2f1 -Sc 0.1 -G black table_5.11 -K > 2D.ps
grdcontour -JX6i -B 2f1 -O -C 25 -A 50 S1987.grd >> 2D.ps
To use Cartesian splines in tension but only evaluate the solution where the input mask
grid is not NaN, try
greenspline table_5.11 -T mask.grd -St 0.5 -V -D 1 -G WB1998.grd
To use Cartesian generalized splines in tension and return the magnitude of the surface
slope in the NW direction, try
greenspline table_5.11 -R 0/6.5/-0.2/6.5 -I 0.1 -Sr 0.95 -V -D 1 -Q-45 -G slopes.grd
Finally, to use Cartesian minimum curvature splines in recovering a surface where the
input data is a single surface value (pt.d) and the remaining constraints specify only the
surface slope and direction (slopes.d), use
greenspline pt.d -R-3.2/3.2/-3.2/3.2 -I 0.1 -Sc -V -D 1 -A 1,slopes.d -G slopes.grd
3-D EXAMPLES
To create a uniform 3-D Cartesian grid table based on the data in table_5.23 in Davis
(1986) that contains x,y,z locations and a measure of uranium oxide concentrations (in
percent), try
greenspline table_5.23 -R 5/40/-5/10/5/16 -I 0.25 -Sr 0.85 -V -D 5 -G 3D_UO2.txt
2-D SPHERICAL SURFACE EXAMPLES
To recreate Parker's [1994] example on a global 1x1 degree grid, assuming the data are in
file mag_obs_1990.d, try
greenspline -V -Rg -Sp -D 3 -I 1 -G P1994.grd mag_obs_1990.d
To do the same problem but applying tension and use pre-calculated Green functions, use
greenspline -V -Rg -SQ 0.85 -D 3 -I 1 -G WB2008.grd mag_obs_1990.d
CONSIDERATIONS
(1) For the Cartesian cases we use the free-space Green functions, hence no boundary
conditions are applied at the edges of the specified domain. For most applications this
is fine as the region typically is arbitrarily set to reflect the extent of your data.
However, if your application requires particular boundary conditions then you may consider
using surface instead.
(2) In all cases, the solution is obtained by inverting a n x n double precision matrix
for the Green function coefficients, where n is the number of data constraints. Hence,
your computer's memory may place restrictions on how large data sets you can process with
greenspline. Pre-processing your data with blockmean, blockmedian, or blockmode is
recommended to avoid aliasing and may also control the size of n. For information, if n =
1024 then only 8 Mb memory is needed, but for n = 10240 we need 800 Mb. Note that
greenspline is fully 64-bit compliant if compiled as such.
(3) The inversion for coefficients can become numerically unstable when data neighbors are
very close compared to the overall span of the data. You can remedy this by pre-
processing the data, e.g., by averaging closely spaced neighbors. Alternatively, you can
improve stability by using the SVD solution and discard information associated with the
smallest eigenvalues (see -C).
TENSION
Tension is generally used to suppress spurious oscillations caused by the minimum
curvature requirement, in particular when rapid gradient changes are present in the data.
The proper amount of tension can only be determined by experimentation. Generally, very
smooth data (such as potential fields) do not require much, if any tension, while rougher
data (such as topography) will typically interpolate better with moderate tension. Make
sure you try a range of values before choosing your final result. Note: the regularized
spline in tension is only stable for a finite range of scale values; you must experiment
to find the valid range and a useful setting. For more information on tension see the
references below.
REFERENCES
Davis, J. C., 1986, Statistics and Data Analysis in Geology, 2nd Edition, 646 pp., Wiley,
New York,
Mitasova, H., and L. Mitas, 1993, Interpolation by regularized spline with tension: I.
Theory and implementation, Math. Geol., 25, 641-655.
Parker, R. L., 1994, Geophysical Inverse Theory, 386 pp., Princeton Univ. Press,
Princeton, N.J.
Sandwell, D. T., 1987, Biharmonic spline interpolation of Geos-3 and Seasat altimeter
data, Geophys. Res. Lett., 14, 139-142.
Wessel, P., and D. Bercovici, 1998, Interpolation with splines in tension: a Green's
function approach, Math. Geol., 30, 77-93.
Wessel, P., and J. M. Becker, 2008, Interpolation using a generalized Green's function for
a spherical surface spline in tension, Geophys. J. Int, 174, 21-28.
Wessel, P., 2009, A general-purpose Green's function interpolator, Computers &
Geosciences, 35, 1247-1254, doi:10.1016/j.cageo.2008.08.012.
SEE ALSO
GMT(1), gmtmath(1), nearneighbor(1), psxy(1), surface(1), triangulate(1), xyz2grd(1)