NAME

       gt-convertseq - Parse and convert sequence file formats.

SYNOPSIS

       gt convertseq [options] file [...]

OPTIONS

       -v
           be verbose (default: no)

       -r
           reverse complement sequences (default: no)

       -showfilelengthvalues
           show filelengths (default: no)

       -noseq
           do not show sequences (default: no)

       -fastawidth
           FASTA output line width (default: 60)

       -contractdnawc
           replace stretches of DNA wildcards with a single N (default: no)

       -contractproteinwc
           replace stretches of protein wildcards with a single X (default: no)

       -o
           redirect output to specified file (default: undefined)

       -gzip
           write gzip compressed output file (default: no)

       -bzip2
           write bzip2 compressed output file (default: no)

       -force
           force writing to output file (default: no)

       -help
           display help and exit

       -version
           display version information and exit

AUTHOR

       Report bugs to <gt-users@genometools.org>.

                                            10/07/2012                           GT-CONVERTSEQ(1)