Provided by: mia-tools_2.0.13-1_amd64
NAME
mia-meshdistance-to-stackmask - Evaluate the distance between a binary shape given as reference and a mesh.
SYNOPSIS
mia-meshdistance-to-stackmask -i <in-mesh> -r <ref-mask> -o <out-mesh> [options]
DESCRIPTION
mia-meshdistance-to-stackmask This program takes a binary masks and a triangular mesh as input and evaluates the distance of the mesh vertices to the binary maskand stores the result in a new mesh.
OPTIONS
-i --in-mesh=(required) input mesh For supported file types see PLUGINS:mesh/io -r --ref-mask=(required) reference binary mask For supported file types see PLUGINS:2dimage/io -o --out-mesh=(required) output mesh For supported file types see PLUGINS:mesh/io Help & Info -V --verbose=warning verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are: info ‐ Low level messages warning ‐ Warnings error ‐ Report errors fail ‐ Report test failures message ‐ Normal messages fatal ‐ Report only fatal errors --copyright print copyright information -h --help print this help -? --usage print a short help --version print the version number and exit Processing --threads=-1 Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
PLUGINS: 2dimage/io
bmp BMP 2D-image input/output support Recognized file extensions: .BMP, .bmp Supported element types: binary data, unsigned 8 bit, unsigned 16 bit datapool Virtual IO to and from the internal data pool Recognized file extensions: .@ dicom 2D image io for DICOM Recognized file extensions: .DCM, .dcm Supported element types: unsigned 16 bit exr a 2dimage io plugin for OpenEXR images Recognized file extensions: .EXR, .exr Supported element types: unsigned 32 bit, floating point 32 bit jpg a 2dimage io plugin for jpeg gray scale images Recognized file extensions: .JPEG, .JPG, .jpeg, .jpg Supported element types: unsigned 8 bit png a 2dimage io plugin for png images Recognized file extensions: .PNG, .png Supported element types: binary data, unsigned 8 bit, unsigned 16 bit raw RAW 2D-image output support Recognized file extensions: .RAW, .raw Supported element types: binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit tif TIFF 2D-image input/output support Recognized file extensions: .TIF, .TIFF, .tif, .tiff Supported element types: binary data, unsigned 8 bit, unsigned 16 bit, unsigned 32 bit vista a 2dimage io plugin for vista images Recognized file extensions: .V, .VISTA, .v, .vista Supported element types: binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
PLUGINS: mesh/io
datapool Virtual IO to and from the internal data pool Recognized file extensions: .@ off plugin to load/store some Geomview OFF Files Recognized file extensions: .OFF, .off ply Ply triangle mesh input/output support Recognized file extensions: .PLY, .ply stl STL mesh io plugin Recognized file extensions: .STL, .stl vista Vista/Simbio triangle mesh input/output support Recognized file extensions: .V, .VMESH, .v, .vmesh vtk A subset of VTK mesh in-and output: Triangle meshes are written, and triangle meshes and triangle strips are read. Additional per-vertex attributes are supported: 'normals', 'colors' for three component colors, and 'scale' for a scalar value attached to each vertex. The data is written by the vtkPolyDataWriter in binary format. Recognized file extensions: .VTK, .VTKMESH, .vtk, .vtkmesh
EXAMPLE
Evaluate the distance of the mask given in the images maskXXXX.png to the mesh given in mesh.v and save the result to mesh-dist.v mia-meshdistance-to-stackmask -i mesh.v -r maskXXXX.png -o mesh-dist.v
AUTHOR(s)
Gert Wollny
COPYRIGHT
This software is Copyright (c) 1999‐2013 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.