NAME

       nps2gps - convert nucleotide-protein sets to ASN.1 genomic product sets

SYNOPSIS

       nps2gps  [-]  [-D]  [-F] [-G str] [-L] [-N] [-P] [-Q] [-R] [-T] [-U] [-f str] [-i filename] [-o filename]
       [-p path] [-r path] [-x str]

DESCRIPTION

       nps2gps converts NCBI Bioseq-sets from simple  nucleotide-protein  sets  to  full  genomic  product  sets
       complete with mRNA transcripts, which it outputs as text ASN.1.

OPTIONS

       A summary of options is included below.

       -      Print usage message

       -D     RefSeq mRNA Titles

       -F     Map by Feature ID

       -G str General ID database name

       -L     Lock components in advance

       -N     Promote Non-coding RNAs

       -P     mRNA ID from Protein

       -Q     Special mRNA titles

       -R     Enable Remote fetching from ID

       -T     Map by Transcript ID

       -U     Remove Unnecessary gene cross-references

       -f str Substring filter

       -i filename
              Single input file (default = stdin)

       -o filename
              Single output file (default = stdout)

       -p path
              Path to files for batch conversion

       -r path
              Path for results of batch conversion

       -x str File selection suffix for batch conversion (default = .ent)

AUTHOR

       The National Center for Biotechnology Information.

SEE ALSO

       asn2asn(1), asn2ff(1), asn2gb(1), asn2xml(1), asndhuff(1).

NCBI Tools User's Manual                           2012-06-24                                         NPS2GPS(1)