NAME

       print_biom_table_summary - summarize sample or observation data in BIOM-formatted files

SYNOPSIS

       Detailed         usage        examples        can        be        found        here:        http://biom-
       format.org/documentation/summarizing_biom_tables.html

DESCRIPTION

       Script to summarize sample or observation data in BIOM-formatted files.

OPTIONS

       --version
              show program's version number and exit

       -h, --help
              show this help message and exit

              Required Options:

       -i INPUT_FP, --input_fp=INPUT_FP
              the input BIOM filepath

              Optional Options:

       -o OUTPUT_FP, --output_fp=OUTPUT_FP
              Path to write output summary [default: write to stdout]

       --num_observations
              Counts are presented as number of unique  observation  ids  per  sample,  rather  than  counts  of
              observations per sample [default: False]

       --suppress_md5
              Do  not  include  the  md5sum  of the table in the output (can be useful if you're concerned about
              runtime of this script) [default: False]

print_biom_table_summary 1.1.2                    October 2013                       PRINT_BIOM_TABLE_SUMMARY(1)