Provided by: snap_2010-07-28-2_amd64
NAME
snap - Semi-HMM-based Nucleic Acid Parser
SYNOPSIS
snap [options] <HMM file> <FASTA file> [options]
OPTIONS
-help report useful information -lcmask treat lowercase as N -plus predict on plus strand only -minus predict on minus strand only -gff output annotation as GFF -ace output annotation as ACED -quiet do not send progress to STDERR -aa <file> create FASTA file of proteins -tx <file> create FASTA file of transcripts -xdef <file> external definitions -name <string> name for the gene [default snap]