Bio::MAGE::Tools::MGEDOntologyClassEntry

   SYNOPSIS
         use Bio::MAGE::Tools::MGEDOntologyClassEntry;
         use Bio::MAGE::Tools::MGEDOntologyHelper;
         use Bio::MAGE::QuantitationType::MeasuredSignal;

         my $mo_helper = Bio::MAGE::Tools::MGEDOntologyHelper->new(
                               sourceFile => 'MGEDOntology.owl',
                         );

         my $qt = Bio::MAGE::QuantitationType::MeasuredSignal->new(
                    identifier => 'QT1',
                    isBackground => 'false',
                  );

         my $ont_entry = Bio::MAGE::Tools::MGEDOntologyClassEntry->new(
                           parentObject => $qt,
                           className => 'QuantitationType',
                           association => 'DataType',
                           values => {
                                   DataType => 'float',
                                   },
                           ontology => $mo_helper,
                         );

   DESCRIPTION
       This provides functionaliy for an ontology-aware OntologyEntry class for entries of type Class.

       Bio::MAGE::Tools::MGEDOntologyClassEntry is a concrete class.

       Superclass is: Bio::MAGE::Tools::MGEDOntologyEntry

       Subclasses are: none

   ATTRIBUTES
       Attributes are simple data types that belong to a single instance of a class. In the Perl implementation
       of the MAGE-OM classes, the interface to attributes is implemented using separate setter and getter
       methods for each attribute.

       mgedOntologyClass
           Stores the name of the equivalent class or property in the MGED Ontology for this OntologyEntry

       isInstantiable
           Stores true if the class is an instantiable one.

       isInstantiable
           Contains  a  hash  reference to a list of OM clases that are circular references which should only be
           followed one level.

BUGS

       Please send bug reports to the project mailing list: (mged-mage 'at' lists 'dot' sf 'dot' net)

AUTHOR

       Eric W. Deutsch (edeutsch 'at' systemsbiology 'dot' org) followup work by Jason E. Stewart  (jasons  'at'
       cpan 'dot' org)

SEE ALSO

       perl(1).

POD ERRORS

       Hey! The above document had some coding errors, which are explained below:

       Around line 655:
           You forgot a '=back' before '=head1'

perl v5.18.1                                       2006-08-23              MAGE::Tools::M...ologyClassEntry(3pm)