NAME

       Bio::Graphics::Browser2::PluginSet -- A set of plugins

SYNOPSIS

       None.  Used internally by gbrowse & gbrowse_img.

METHODS

       $plugin_set = Bio::Graphics::Browser2::PluginSet->new($config,$page_settings,@search_path)
           Initialize plugins according to the configuration, page settings and the plugin search
           path.  Returns an object.

       $plugin_set->configure($database)
           Configure the plugins given the database.

       $plugin_set->annotate($segment,$feature_files,$rel2abs)
           Run plugin annotations on the $segment, adding the resulting feature files to the hash
           ref in $feature_files ({track_name=>$feature_list}).  The $rel2abs argument holds a
           coordinate mapper callback, but is currently unused.

SEE ALSO

       Bio::Graphics::Browser2

AUTHOR

       Lincoln Stein <lstein@cshl.org>.

       Copyright (c) 2005 Cold Spring Harbor Laboratory

       This library is free software; you can redistribute it and/or modify it under the same
       terms as Perl itself.  See DISCLAIMER.txt for disclaimers of warranty.