Provided by: libbio-perl-perl_1.6.923-1_all
NAME
Bio::Restriction::IO::itype2 - itype2 enzyme set
SYNOPSIS
Do not use this module directly. Use it via the Bio::Restriction::IO class.
DESCRIPTION
This is tab delimited, entry per line format which is fast to process.
FEEDBACK
Mailing Lists User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing lists Your participation is much appreciated. bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists Support Please direct usage questions or support issues to the mailing list: bioperl-l@bioperl.org rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible. Reporting Bugs Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web: https://redmine.open-bio.org/projects/bioperl/
AUTHOR
Rob Edwards, redwards@utmem.edu
CONTRIBUTORS
Heikki Lehvaslaiho, heikki-at-bioperl-dot-org Mark A. Jensen, maj-at-fortinbras-dot-us
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ read Title : read Usage : $renzs = $stream->read Function: reads all the restrction enzymes from the stream Returns : a Bio::Restriction::IO object Args : none Internally creates a hash of enzyme information which is passed on to Bio::Restriction::Enzyme::new. _xln_sub Title : _xln_sub Function: Translates withrefm coords to Bio::Restriction coords Args : Bio::Restriction::Enzyme object, scalar integer (cut posn) Note : Used internally; pass as a coderef to the B:R::Enzyme constructor write Title : write Usage : $stream->write($renzs) Function: writes restriction enzymes into the stream Returns : 1 for success and 0 for error Args : a Bio::Restriction::Enzyme or a Bio::Restriction::EnzymeCollection object