Provided by: libgo-perl_0.15-1_all
NAME
GO::Model::Seq - biological sequence
SYNOPSIS
print $gene_product->seq->seq;
DESCRIPTION
represents a biological sequence; uses the bioperl Bio::PrimarySeq class any call that you can do on a bioperl sequence object, you can do here, with the addition of the calls below to get bioperl, see http://www.bioperl.org pseq Usage - Returns - Bio::PrimarySeq Args - md5checksum Usage - my $md5 = $seq->md5checksum() OR $seq->md5checksum($md5) Returns - 32 char hex string Args - 32 char hex string [optional] checksum for seq - easy way to check if it has been changed etc (requires Digest::MD5 module from CPAN) to_fasta Usage - Returns - Args - add_xref - Usage : $term->add_xref($xref); - Args : GO::Term::Xref