Provided by: cpl-plugin-sinfo-doc_2.4.0+dfsg-3_all 
NAME
sinfo_utl_skycor - Sky lines residuals correction
SYNOPSIS
esorex sinfo_utl_skycor [OPTIONS] FILE.sof
DESCRIPTION
This recipe perform a correction of possible sky line residuals in the object cube after
standard data reduction.
Input frames are cubes with target and sky observations.
Their tags can be respectively OBS_OBJ (or OBS_PSF or OBS_STD) and OBS_SKY.
The output is a cube with same tag as the corresponding input target frame.
OPTIONS
--skycor-mask_ws <float>
Starting wavelength for object-sky cross correlation (float; default: 1.4). The
full name of this option for the EsoRex configuration file is
sinfoni.sinfo_utl_skycor.mask_ws [default = 1.4].
--skycor-mask_we <float>
End wavelength for object-sky cross correlation (float; default: 2.5). The full
name of this option for the EsoRex configuration file is
sinfoni.sinfo_utl_skycor.mask_we [default = 2.5].
--skycor-min_frac <float>
Threshold value for fraction of spatial pixels to be sky (float; default: 0.8). The
full name of this option for the EsoRex configuration file is
sinfoni.sinfo_utl_skycor.min_frac [default = 0.8].
--skycor-sky_bkg_filter_width <long>
Width of sky-thermal background pre filter (to remove emission lines before fitting
a Black Body). (long; default: 12). The full name of this option for the EsoRex
configuration file is sinfoni.sinfo_utl_skycor.sky_bkg_filter_width [default = 12].
--skycor-line_hw <float>
Threshold value for full width in pixels of unresolved emission line. Lines with
FWHM smaller than this value are not considered in the object-sky cross correlation
and in computation of the optimal sky lines scaling factor (float; default: 4.0).
The full name of this option for the EsoRex configuration file is
sinfoni.sinfo_utl_skycor.line_half_width [default = 4.0].
--skycor-scale_method <long>
Optimal sky lines scaling factor computation method: amoeba fit (0), maximum
likelihood (1) (long; default: 1). The full name of this option for the EsoRex
configuration file is sinfoni.sinfo_utl_skycor.scale_method [default = 1].
--skycor-rot_cor <bool>
Computes scaling factor correction due to rotational levels transitions (bool;
default: False). The full name of this option for the EsoRex configuration file is
sinfoni.sinfo_utl_skycor.rot_cor [default = False].
--skycor-fit_obj_noise <bool>
Do Gaussian fit of object noise (bool; default: False). The full name of this
option for the EsoRex configuration file is sinfoni.sinfo_utl_skycor.fit_obj_noise
[default = False].
--skycor-niter <long>
Number of iterations of background fit (long; default: 10). The full name of this
option for the EsoRex configuration file is sinfoni.sinfo_utl_skycor.niter [default
= 10].
--skycor-pshift <float>
Sky spectrum shift towar object (float; default: 0.0). The full name of this option
for the EsoRex configuration file is sinfoni.sinfo_utl_skycor.pshift [default =
0.0].
--skycor-llx <long>
Lower left X defining object spectrum location (long; default: 1). The full name of
this option for the EsoRex configuration file is sinfoni.sinfo_utl_skycor.llx
[default = 1].
--skycor-lly <long>
Lower left Y defining object spectrum location (long; default: 1). The full name of
this option for the EsoRex configuration file is sinfoni.sinfo_utl_skycor.lly
[default = 1].
--skycor-urx <long>
Upper right X defining object spectrum location (long; default: 64). The full name
of this option for the EsoRex configuration file is sinfoni.sinfo_utl_skycor.urx
[default = 64].
--skycor-ury <long>
Upper right Y defining object spectrum location (long; default: 64). The full name
of this option for the EsoRex configuration file is sinfoni.sinfo_utl_skycor.ury
[default = 64].
--skycor-sub_thr_bkg_from_obj <bool>
Subtract thermal background contribute from object spectra. Set it to TRUE if
stack-sub_raw_sky is set to FALSE (bool; default: False). The full name of this
option for the EsoRex configuration file is
sinfoni.sinfo_utl_skycor.sub_thr_bkg_from_obj [default = False].
Note that it is possible to create a configuration file containing these options, along
with suitable default values. Please refer to the details provided by the 'esorex --help'
command.
SEE ALSO
The full documentation for the sinfo pipeline can be downloaded as a PDF file using the
following URL:
ftp://ftp.eso.org/pub/dfs/pipelines/sinfoni/sinfo-pipeline-manual-19.0.pdf
An overview over the existing ESO pipelines can be found on the web page
http://www.eso.org/sci/software/pipelines/.
Basic documentation about the EsoRex program can be found at the esorex (1) man page.
It is possible to call the pipelines from python using the python-cpl package. See
http://packages.python.org/python-cpl/index.html for further information.
The other recipes of the sinfo pipeline are sinfo_rec_detlin(7), sinfo_rec_wavecal(7),
sinfo_utl_ima_line_corr(7), sinfo_utl_cube_combine(7), sinfo_utl_bp_mask_add(7),
sinfo_utl_cube2spectrum(7), sinfo_utl_cube_create(7), sinfo_rec_distortion(7),
sinfo_utl_spectrum_divide_by_blackbody(7), sinfo_utl_line_oh_select(7),
sinfo_utl_cube2ima(7), sinfo_utl_cube_arith(7), sinfo_rec_pupil(7), sinfo_rec_mflat(7),
sinfo_utl_ima_arith(7), sinfo_utl_spectrum_wavelength_shift(7), sinfo_utl_skymap(7),
sinfo_rec_mdark(7), sinfo_rec_jitter(7)
VERSION
sinfo_utl_skycor 2.4.0
AUTHOR
Andrea Modigliani <Andrea.Modigliani@eso.org>
BUG REPORTS
Please report any problems to Andrea.Modigliani@eso.org. Alternatively, you may send a
report to the ESO User Support Department <usd-help@eso.org>.
LICENSE
This file is part of the SINFONI Instrument Pipeline Copyright (C) 2002,2003 European
Southern Observatory
This program is free software; you can redistribute it and/or modify it under the terms of
the GNU General Public License as published by the Free Software Foundation; either
version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program;
if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
MA 02111-1307 USA